AWS/UNIX primer info

The UNIX exercises here are modified versions of the Software Carpentry Unix shell lesson. Licensed under CC-BY 4.0 2018–2021 by The Carpentries.

Data download

We will be using Amazon Web Services for the primer session. If you are not able to attend this session live, you can download the data we used here:

You will need a UNIX environment (like a Linux/Mac computer or Windows Subsystem for Linux) to work through the material.

Schedule

Foundational Spatial ’Omics Analysis AWS/UNIX pre-session 2026: Wednesday, September 23, 2026

(ET) Module
10:00 Welcome Introduction
10:10 Module 1: Logging into AWS
11:10 Short Break
11:15 Module 2: Introduction to the UNIX Command Line
11:35 Module 3: File Manipulation
12:05 Long Break
13:05 Module 4: Searching and Sorting Through Files
14:00 Short Break
14:05 Module 5: Shell scripts
15:00 Finished