AWS/UNIX primer info

The UNIX exercises here are modified versions of the Software Carpentry Unix shell lesson. Licensed under CC-BY 4.0 2018–2021 by The Carpentries.

Data download

We will be using Amazon Web Services for the primer session. If you are not able to attend this session live, you can download the data we used here:

You will need a UNIX environment (like a Linux/Mac computer or Windows Subsystem for Linux) to work through the material.

Schedule

Beginner/Advanced Microbiome Analysis 2025: Friday, May 23, 2025

(PST) (EST) Module
9:00 12:00 Welcome Introduction
9:10 12:10 Module 1: Logging into AWS
10:10 13:10 Short Break
10:15 13:15 Module 2: Introduction to the UNIX Command Line
10:35 13:35 Module 3: File Manipulation
11:05 14:05 Long Break
12:05 15:05 Module 4: Searching and Sorting Through Files
13:00 16:00 Short Break
13:05 16:05 Module 5: Shell scripts
14:00 17:00 Finished