Introductory Spatial 'Omics Analysis 2024
Welcome
The course schedule can be found here
Pre-Workshop Materials
Pre-work including programs to install can be found here.
Class Photo
Coming soon!
Scripts
All scripts are available here in both Python Notebook and HTML format. Download links to data and instructions to create an Amazon Machine Image are available at the bottom of this page.
Day 1
Keynote
Keynote Slides
Keynote Recording
Module 1
Module 1 Lecture Slides
Module 1.1 Lecture Recording
Module 1.2 Lecture Recording
Module 1.3 Lecture Recording
Module 1.4 Lecture Recording
Module 2
Module 2 Lecture Slides
Module 2 Lecture Recording
Module 3
Module 3 Lecture Slides
Module 3 Lecture Recording
Day 2
Module 4
Module 4 Lecture Slides
Module 4 Lecture Recording
Modules 5 and 6
Modules 5 and 6 Lecture Slides
Modules 5 and 6 Lecture Recording
Wrap-up
Wrap-up Lecture Slides
Wrap-up Lecture Recording
Post-Workshop Materials
CourseData
Note that some of these files are quite large. If you have issues downloading them, try copying the link address, opening a new blank tab, and entering the URL into the new tab’s address bar. If that fails, contact us at support@bioinformatics.ca.
AMI
We have made our AWS AMI (Amazon Machine Image) publicly available. To launch your own instance, follow the instructions provided by Amazon on how to launch an EC2 instance from a custom Amazon Machine Image. Please note that you will need an AWS account to proceed, and that you will need to upload the CourseData files yourself.
Here are the details of the AMI:
- AWS Region: us-east-1 (N. Virgina)
- AMI type: public image
- AMI name: CBW_ISO_240702
- AMI ID: ami-0e35aedc51010d5b4
If you want to create and activate a new AWS account, please follow the instructions provided by Amazon.