Microbiome Analysis 2021
Welcome
The course schedule can be found here
Meet your faculty here
Pre-Workshop Materials
Pre-work including programs to install can be found here
Videos can be found here.
AWS Module
Connecting and properly using a cloud computing cluster at the CBW here
Class Photo
comming soon
Day 1
Welcome
Rachade/Francis
Module 1: Introduction
William Hsiao
Module 2: Taxonomic Analysis + Stats Module
Rob Beiko
Labs
Module 3: Bridging Taxonomy and Function
Morgan Langille
Labs
Day 2
Module 4: Metagenome Taxa/ Functional Annotation
Morgan Langille
Labs
Module 5: Metagenome Assembly & MAGs
Laura Hug
Labs
Day 3
Module 6: Metatranscriptomics
John Parkinson
Labs
Lab Module 6 (Recommended reading)
Biomarker
Fiona Brinkman
Integrated Assignment
Zohaib Anwar & Justin Jia