Patrick Aboyoun [aut],
  Hervé Pagès [aut, cre],
  Michael Lawrence [aut],
  Sonali Arora [ctb],
  Martin Morgan [ctb],
  Kayla Morrell [ctb],
  Valerie Obenchain [ctb],
  Marcel Ramos [ctb],
  Lori Shepherd [ctb],
  Dan Tenenbaum [ctb],
  Daniel van Twisk [ctb]

Utilities for manipulating chromosome names, including modifying
them to follow a particular naming style

Contains data and functions that
	define and allow translation between different chromosome
	sequence naming conventions (e.g., "chr1" versus "1"),
	including a function that attempts to place sequence names in
	their natural, rather than lexicographic, order.

c(
	person("Sonali", "Arora", role="aut"),
	person("Martin", "Morgan", role="aut"),
	person("Marc", "Carlson", role="aut"),
	person("Hervé", "Pagès", role=c("aut", "cre"),
		email="hpages.on.github@gmail.com"),
	person("Prisca Chidimma", "Maduka", role="ctb"),
	person("Atuhurira Kirabo", "Kakopo", role="ctb"),
	person("Haleema", "Khan", role="ctb",
		comment="vignette translation from Sweave to Rmarkdown / HTML"),
	person("Emmanuel Chigozie", "Elendu", role="ctb"))

stats, stats4, utils, UCSC.utils, GenomeInfoDbData

R.utils, data.table, GenomicRanges, Rsamtools,
GenomicAlignments, GenomicFeatures, BSgenome,
TxDb.Dmelanogaster.UCSC.dm3.ensGene,
BSgenome.Scerevisiae.UCSC.sacCer2, BSgenome.Celegans.UCSC.ce2,
BSgenome.Hsapiens.NCBI.GRCh38, RUnit, BiocStyle, knitr

utils.R fetch_table_dump_from_Ensembl_FTP.R list_ftp_dir.R
rankSeqlevels.R NCBI-utils.R UCSC-utils.R Ensembl-utils.R
getChromInfoFromNCBI.R getChromInfoFromUCSC.R
getChromInfoFromEnsembl.R loadTaxonomyDb.R mapGenomeBuilds.R
seqinfo.R Seqinfo-class.R seqlevelsStyle.R seqlevels-wrappers.R
GenomeDescription-class.R zzz.R

Sonali Arora [aut],
  Martin Morgan [aut],
  Marc Carlson [aut],
  Hervé Pagès [aut, cre],
  Prisca Chidimma Maduka [ctb],
  Atuhurira Kirabo Kakopo [ctb],
  Haleema Khan [ctb] (vignette translation from Sweave to Rmarkdown /
    HTML),
  Emmanuel Chigozie Elendu [ctb]

Foundation of integer range manipulation in Bioconductor