HDF5Array (>= 1.7.5), annotate, AnnotationDbi, hgu95av2.db,
GenomicFeatures, TxDb.Hsapiens.UCSC.hg19.knownGene, jsonlite,
rhdf5, airway (>= 1.15.1), BiocStyle, knitr, rmarkdown, RUnit,
testthat, digest

Assays-class.R SummarizedExperiment-class.R
RangedSummarizedExperiment-class.R intra-range-methods.R
inter-range-methods.R coverage-methods.R combine-methods.R
findOverlaps-methods.R nearest-methods.R
makeSummarizedExperimentFromExpressionSet.R
makeSummarizedExperimentFromDataFrame.R
makeSummarizedExperimentFromLoom.R zzz.R

Martin Morgan [aut],
  Valerie Obenchain [aut],
  Jim Hester [aut],
  Hervé Pagès [aut, cre]

Biobase: Base functions for Bioconductor

Functions that are needed by many other packages or which
        replace R functions.

c(
    person("R.", "Gentleman", role="aut"),
    person("V.", "Carey", role = "aut"),
    person("M.", "Morgan", role="aut"),
    person("S.", "Falcon", role="aut"),
    person("Haleema", "Khan",
        role = "ctb",
        comment = "'esApply' and 'BiobaseDevelopment' vignette translation from Sweave to Rmarkdown / HTML"
    ),
    person("Bioconductor Package Maintainer",
        role = "cre",
        email = "maintainer@bioconductor.org"
    ))

tools, tkWidgets, ALL, RUnit, golubEsets, BiocStyle, knitr,
limma

tools.R strings.R environment.R vignettes.R packages.R
AllGenerics.R VersionsClass.R VersionedClasses.R
methods-VersionsNull.R methods-VersionedClass.R DataClasses.R
methods-aggregator.R methods-container.R methods-MIAxE.R
methods-MIAME.R methods-AssayData.R
methods-AnnotatedDataFrame.R methods-eSet.R
methods-ExpressionSet.R methods-MultiSet.R methods-SnpSet.R
methods-NChannelSet.R anyMissing.R rowOp-methods.R
updateObjectTo.R methods-ScalarObject.R zzz.R

R. Gentleman [aut],
  V. Carey [aut],
  M. Morgan [aut],
  S. Falcon [aut],
  Haleema Khan [ctb] ('esApply' and 'BiobaseDevelopment' vignette
    translation from Sweave to Rmarkdown / HTML),
  Bioconductor Package Maintainer [cre]

Representation and manipulation of genomic intervals