| Time (Eastern) |
Module |
Time (Eastern) |
Module |
Time (Eastern) |
Module |
| 8:30 |
Arrivals & Check-in |
8:30 |
Arrivals |
8:30 |
Arrivals |
| 9:00 |
Welcome (Nia Hughes) |
9:00 |
Module 4: More Depth on Pathway and Network Analysis (Lincoln Stein) |
9:00 |
Module 6: Review of the tools in integrated workflow Part2 (Veronique Voisin/Ruth Isserlin) |
| 9:30 |
Module 1: Introduction to pathway and network analysis (Gary Bader) |
|
|
|
|
| 10:00 |
Break (30min) |
10:00 |
Break (30min) |
10:30 |
Break (30min) |
| 10:30 |
Module 2: Finding over-represented pathways in gene lists (Veronique Voisin) |
10:30 |
Module 4 Lab: Reactome FI (Veronique Voisin) |
11:00 |
Module 6: Review of the tools. Scripted pipeline. Questions and Answers. Work with your own data (Veronique Voisin/Ruth Isserlin) |
| 11:30 |
Module 2 Lab (Ruth Isserlin) |
|
|
|
|
| 12:30 |
Lunch (1hour) |
12:30 |
Lunch (1hour) |
12:30 |
Survey and Closing Remarks |
| 13:30 |
Module 2 Lab continued (Ruth Isserlin) |
13:30 |
Module 5: Gene Function Prediction (recorded lecture + 15 min presentation + lab (Veronique Voisin) |
|
|
| 14:30 |
Module 3: Network visualization and analysis with Cytoscape (Ruth Isserlin) |
|
|
|
|
| 15:30 |
Break (30min) |
15:00 |
Break (30min) |
|
|
| 16:00 |
Module 3 Lab (Ruth Isserlin) |
15:00 |
Module 6: Review of the tools in integrated workflows Part 1 (Veronique Voisin/Ruth Isserlin) |
|
|
| 17:30 |
Finished |
17:00 |
Finished |
|
|
