| 8:30 |
Arrivals & Check-in |
8:30 |
Arrivals |
8:30 |
Arrivals |
| 9:00 |
Welcome (Nia Hughes) |
9:00 |
Module 4: More Depth on Pathway and Network Analysis (Lincoln Stein) |
9:00 |
Module 7: Review of the tools in integrated workflow. Part1. (Veronique Voisin/Ruth Isserlin/Chaitra Sarathy) |
| 9:30 |
Module 1: Introduction to pathway and network analysis (Gary Bader) |
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| 10:00 |
Break (30min) |
10:00 |
Break (30min) |
10:30 |
Break (30min) |
| 10:30 |
Module 2: Finding over-represented pathways in gene lists (Veronique Voisin) |
10:30 |
Module 4: Lab (Reactome FI) (Veronique Voisin) |
11:00 |
Module 7: Review of the tools in integrated workflow. Part2. (Veronique Voisin/Ruth Isserlin/Chaitra Sarathy) |
| 11:30 |
Module 2 lab (Ruth Isserlin) |
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| 12:30 |
Lunch (1h) |
12:30 |
Class Photo and Lunch (1h) |
12:30 |
Survey and Closing Remarks |
| 13:30 |
Module 3: Network visualization and analysis with Cytoscape (Ruth Isserlin) |
13:30 |
Module 5: Gene Function Prediction (recorded lecture + 15 min presentation + lab) (Veronique Voisin) |
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| 14:30 |
Module3 Lab1 : Cytoscape basics. custom network(Ruth Isserlin) |
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| 15:00 |
Break (30min) |
14:30 |
Break (30min) |
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| 15:30 |
Module 3 part 2: EnrichmentMap lecture |
15:00 |
Module 6: Cell-Cell Communication (Gregory Schwartz) |
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| 16:00 |
Module 3 Lab 2: EnrichmentMap and AutoAnnotate |
16:00 |
Module 6 lab (Veronique Voisin) |
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| 17:30 |
Finished |
17:30 |
Finished |
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