Datasetranked_basal_vs_classical
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_E2F_TARGETS%MSIGDBHALLMARK%HALLMARK_E2F_TARGETS
Enrichment Score (ES)0.6005922
Normalized Enrichment Score (NES)2.06162
Nominal p-value0.0
FDR q-value0.0015104377
FWER p-Value0.015
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_E2F_TARGETS%MSIGDBHALLMARK%HALLMARK_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TUBB2087.6330.0203Yes
2GINS42716.5790.0444Yes
3HMGB33545.7820.0640Yes
4RFC23705.7050.0871Yes
5SSRP13825.6470.1101Yes
6TRIP133865.6140.1334Yes
7CHEK14395.2500.1525Yes
8MCM24725.0330.1718Yes
9MCM75244.7090.1887Yes
10NUP1075254.6980.2083Yes
11TK16004.3540.2224Yes
12PLK46044.3260.2404Yes
13MCM67003.9470.2516Yes
14ATAD27373.8530.2657Yes
15GINS37663.7730.2799Yes
16DLGAP58123.6480.2927Yes
17PRKDC8463.5420.3057Yes
18NASP8653.4930.3193Yes
19SMC48923.4380.3322Yes
20MSH29693.2810.3417Yes
21MYBL210353.1580.3513Yes
22BIRC510423.1440.3641Yes
23SPC2410603.1060.3762Yes
24CDC2011093.0090.3861Yes
25PAICS12032.8520.3928Yes
26HMMR12092.8340.4044Yes
27PSMC3IP12472.7870.4140Yes
28DCLRE1B12542.7810.4253Yes
29RANBP112742.7500.4358Yes
30TIMELESS12812.7410.4469Yes
31HMGA113722.6020.4528Yes
32CDKN313732.6010.4637Yes
33CDK413982.5510.4730Yes
34CCNB214562.4620.4801Yes
35SPAG514632.4540.4900Yes
36DEPDC115522.3160.4948Yes
37BRMS1L15682.2940.5036Yes
38PLK116582.2020.5078Yes
39EIF2S116792.1710.5158Yes
40NUP20517742.0860.5193Yes
41SUV39H117882.0740.5272Yes
42DSCC118782.0030.5306Yes
43MYC19351.9420.5356Yes
44MCM519401.9390.5435Yes
45PRIM220211.8680.5469Yes
46UBE2S20581.8320.5525Yes
47KIF18B21331.7710.5558Yes
48AURKA21541.7630.5621Yes
49TOP2A21891.7340.5674Yes
50MAD2L124531.5670.5593Yes
51ZW1025141.5370.5624Yes
52GINS125501.5140.5667Yes
53CKS225781.4980.5715Yes
54CENPE26031.4820.5764Yes
55RFC127911.3860.5717Yes
56RRM228041.3790.5768Yes
57CCNE128321.3660.5810Yes
58CDKN2A28351.3640.5866Yes
59UNG28821.3370.5896Yes
60RNASEH2A29381.3100.5920Yes
61BUB1B29431.3060.5973Yes
62RAD2129861.2860.6003Yes
63RAD51C32111.1790.5927Yes
64TRA2B32641.1560.5947Yes
65RAN32751.1500.5989Yes
66NBN34161.0980.5957Yes
67RFC334281.0900.5996Yes
68PTTG136261.0090.5928Yes
69RQCD136331.0070.5967Yes
70TCF1937580.9590.5938Yes
71RAD51AP137800.9450.5966Yes
72CDKN1B37950.9390.5997Yes
73BRCA138490.9170.6006Yes
74NUDT2139860.8670.5966No
75STAG141390.8140.5915No
76RPA341780.8020.5928No
77USP143210.7590.5880No
78HMGB243680.7430.5885No
79CIT43710.7420.5915No
80SMC644200.7280.5919No
81MRE11A45850.6740.5855No
82CDKN2C46300.6650.5858No
83PPP1R847190.6390.5836No
84POLA247210.6380.5862No
85ASF1B47460.6300.5875No
86RPA148500.6060.5843No
87AURKB48510.6050.5868No
88SPC2548760.5980.5880No
89PCNA49590.5820.5858No
90PDS5B49610.5810.5882No
91HELLS50260.5670.5870No
92WEE150690.5580.5870No
93PHF5A52020.5240.5818No
94CKS1B53340.4960.5765No
95RAD153580.4920.5773No
96POLE454500.4700.5742No
97PSIP155720.4450.5693No
98LIG156650.4210.5659No
99CDCA356680.4190.5675No
100PA2G457710.4000.5635No
101ANP32E58030.3940.5634No
102DONSON60690.3450.5500No
103SMC361770.3260.5454No
104CDC25B63680.2970.5360No
105TUBG165330.2720.5280No
106NOP5666550.2560.5223No
107LYAR70130.2060.5032No
108MKI6771400.1900.4969No
109UBE2T74970.1430.4776No
110DUT75590.1360.4748No
111CHEK276980.1200.4676No
112BARD177390.1160.4658No
113EZH279410.0970.4550No
114POP780380.0870.4500No
115PMS282080.0700.4408No
116HUS187370.0190.4113No
117ESPL18966-0.0040.3986No
118BRCA28989-0.0070.3974No
119CDCA89118-0.0190.3903No
120NUP1539260-0.0310.3826No
121ILF39313-0.0360.3798No
122POLD29319-0.0370.3797No
123HNRNPD9429-0.0470.3738No
124AK29554-0.0580.3671No
125SMC1A9561-0.0590.3670No
126MTHFD29764-0.0850.3560No
127RBBP79820-0.0920.3534No
128EED9845-0.0950.3524No
129TACC310051-0.1190.3414No
130RAD5010117-0.1270.3383No
131SLBP10210-0.1390.3338No
132EXOSC810858-0.2250.2985No
133NAA3811010-0.2470.2911No
134E2F811098-0.2600.2873No
135UBR711173-0.2700.2843No
136CDKN1A11370-0.3030.2746No
137DEK11642-0.3470.2609No
138SNRPB12021-0.4210.2415No
139NOLC112242-0.4690.2312No
140DCTPP112918-0.6220.1960No
141MXD313019-0.6440.1931No
142POLE13189-0.6880.1866No
143TFRC13228-0.6980.1874No
144ASF1A13277-0.7110.1876No
145CENPM13305-0.7170.1891No
146ING313693-0.8220.1709No
147CTCF13701-0.8260.1740No
148PPM1D13792-0.8570.1725No
149MCM314404-1.0860.1429No
150WDR9014567-1.1590.1387No
151PNN14620-1.1750.1407No
152PAN215739-1.8490.0859No
153SHMT116468-2.6270.0562No
154POLD316924-3.5080.0454No
155LBR17098-3.9060.0521No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_E2F_TARGETS%MSIGDBHALLMARK%HALLMARK_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for HALLMARK_E2F_TARGETS%MSIGDBHALLMARK%HALLMARK_E2F_TARGETS