Pathways and Network Analysis of -Omics Data 2020


Welcome to Pathways and Network Analysis of -Omics Data 2020.

The course schedule can be found here.

Meet your faculty here

Pre-Workshop Materials and Laptop Setup Instructions

Laptop Setup Instructions

Instructions to setup your laptop can be found here.

Pre-workshop Tutorials

Pre-readings and pre-work can be found here here.
It is in your best interest to complete these before the workshop.

Class photo

Class Photo

Day 1



Module 1: Introduction to Pathway and Network Analysis

Gary Bader

Module 1

Module 2: Finding over-represented pathways in gene lists

Veronique Voisin & Ruth Isserlin

Module 2

Module 2 Lab

Module 3: Network Visualization and Analysis with Cytoscape

Ruth Isserlin

Module 3

Module 3 Lab

Day 2

Module 4: More Depth on Pathway and Network Analysis

Robin Haw

Module 4

Module 4 Lab

Module 5: Regulatory Network Analysis

Michael Hoffman & Veronique Voisin

Module 5

Module 5 Lab

Module 6: Gene Function Prediction

Veronique Voisin

Module 6

Module 6 Lab: Cytoscape

Module 6 Lab: Web

Day 3

Review of the tools : Integrated workflow