| 8:00 |
Registration and Breakfast |
8:00 |
Breakfast |
8:00 |
Breakfast |
8:00 |
Breakfast |
8:00 |
Breakfast |
| 8:30 |
Welcome and Introductions |
8:30 |
Module 3a: Genome Alignment (Simpson) |
8:30 |
Module 5 : Somatic Mutations and Annotation (Morrissy) |
8:30 |
Module 7: Gene Fusion and Rearrangemnts (McPherson) |
8:30 |
Module 8: Variants to Networks (Stein and Haw) |
| 9:00 |
Module 1: Introduction to Cancer Genomics (Pugh) |
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| 10:30 |
Coffee Break |
10:00 |
Coffee Break |
10:30 |
Coffee Break |
10:30 |
Coffee Break |
10:30 |
Coffee Break |
| 11:00 |
Module 2: Databases and Visualization Tools (Ouellette) |
10:30 |
Module 3b: Genome Assembly (Simpson) |
11:00 |
Module 5 Lab |
11:00 |
Module 7 Lab |
11:00 |
Guest Lecture (Jones) |
| 12:30 |
Lunch |
12:30 |
Lunch |
12:30 |
Lunch |
12:30 |
Lunch |
12:30 |
Lunch |
| 1:30 |
Module 2 Lab |
1:30 |
Module 4: Copy Number Variants (Morrissy) |
1:30 |
Module 6: Gene Expression (Yousif) |
1:30 |
Module 8 Variants to Networks (Reimand) |
1:30 |
Module 9: Clinical Data Integration (Goldenberg) |
| 3:00 |
Coffee Break |
3:00 |
Coffee Break |
3:00 |
Coffee Break |
3:00 |
Coffee Break |
3:00 |
Coffee Break |
| 3:30 |
Logging into the Cloud (Ouellette/Lu) |
3:30 |
Module 4 Lab |
3:30 |
Module 6 Lab |
3:30 |
Module 8 Variants to Networks (Reimand) |
3:30 |
Module 9 Lab |
| 5:00 |
Dinner |
5:00 |
Hosted Social |
5:00 |
Dinner |
5:00 |
Dinner |
5:00 |
Survey and Closing Remarks |
| 6:00 |
UNIX and R Review |
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6:00 |
Integrated Assignment |
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