Bioinformatics of Genomic Medicine 2018

Welcome

Welcome to Bioinformatics of Genomic Medicine.

The course schedule can be found here.

Pre-readings, pre-work, and laptop setup instructions can be found here.

We are using Google Classroom for discussion. Join the Class at https://classroom.google.com, select the “+” symbol in the upper right corner, click on “Join Class” and enter the class code provided to you.

The full course notes are available as a single PDF.


Class photo

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Day 1

Welcome

Ann Meyer

Module 1: Introduction to Genetic Disorders

Michael Brudno

Lecture

Recording

Lab Practical

Demo Exomes Zip

Coded Phenotypes Zip

Module 2: Introduction to Tools, Computing Infrastructure, and Data

Mathieu Bourgey

Lecture

Recording

Lab Practical

Module 3: Variant Annotation

Sergey Naumenko

Lecture

Lab Practical

Lab Practical 3b

Module 4: Translating Research Workflows into Clinical Tests

Natalie Stickle

Lecture

Recording


Day 2

Module 5: Available Epigenetics Data and Resources

Guillaume Bourque

Lecture

Recording

Lab Practical

Module 6: Epigenetic Profiling in Disease

Andrei Turinsky

Lecture

Lab Practical

Lab Script

Module 7: Identifying Integrative Subtypes and Building Classifiers

Anna Goldenberg

Lecture

Lab Presentation

Lab Practical

Lab Practical with answers

Lab Data


Survey

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