Infectious Disease Genomic Epidemiology

  Day 1   Day 2   Day 3
8:30 Registration and Breakfast 8:30 Breakfast 8:30 Breakfast
9:00 Welcome (Ann) 9:00 Module 4: Antimicrobial Resistance Genes (Andrew) 9:00 Module 6: Emerging Pathogen Detection and Identification using Metagenomics Samples (Gary)
9:30 Module 1: Introduction to Public Health Microbiology and Genomic Epidemiology (Will)        
11:00 Coffee Break 10:00 Coffee Break 10:00 Coffee Break
11:30 Module 2: Pathogen Genomic Analysis I (Gary) 10:30 Module 4 - lab 10:30 Module 6 - lab
12:30 Lunch 12:30 Lunch 12:30 Lunch
1:30 Module 2 - lab 1:30 Module 5: Phylogeographic Analysis (Rob) 1:30 Module 7: Data Visualization (Anamaria)
2:30 Module 3: Pathogen Genomic Analysis II (Ed)        
3:30 Coffee Break 2:30 Coffee Break 2:30 Coffee Break
4:00 Module 3 - lab 3:00 Module 5 - lab 3:00 Module 7 - lab
5:00 Dinner 5:00 Dinner 5:00 Concluding Discussion and Survey
6:00 Keynote: Open Bioinformatics Takes Centre Stage in Infectious Disease (Fiona)        
7:30 Integrated Assignment 6:00 Integrated Assignment