Informatics on High-Throughput Sequencing Data
Welcome
The course schedule can be found here
Meet your faculty here
Pre-Workshop Materials
Laptop Setup Instructions
Instructions to setup your laptop can be found here.
Pre-workshop Tutorials
Pre-readings and pre-work can be found here here.
It is in your best interest to complete these before the workshop.
Class Photo
Day 1
Welcome
Rachade Hmamouchi
Compute Canada Introduction
Pierre-Olivier Quirion
Module 1: Introduction to High-throughput Sequencing
Jared Simpson
Module 2: Data Visualization
Rob Syme
Module 3: Genome Alignment
Mathieu Bourgey
Connecting to the CC Cluster Zhibin Lu
Integrated Assignment
Day 2
Module 4: Small-Variant Calling and Annotation
Mathieu Bourgey
Module 5: Structural Variant Calling
Rob Syme
Module 6: De Novo Assembly
Jared Simpson