Informatics for RNA-Seq Analysis

  Day 1   Day 2   Day 3
  Monday, July 10   Tuesday, July 11   Wednesday, July 12
8:00 *Registration and Breakfast* 8:00 *Breakfast* 8:00 *Breakfast*
8:30 Welcome (Ann) 8:30 Module 3: Expression and Differential Expression (Obi) 8:30 Module 6: Genome-Free De Novo Transcirpt Assembly (Brian)
9:00 Module 0: Introduction to Cloud Computing (Obi)        
9:30 Module 1: Introduction to RNA Sequencing (Malachi)        
10:30 *Coffee Break* 10:00 *Coffee Break* 10:00 *Coffee Break*
11:00 Module 1 Lab 10:30 Module 3 Lab 10:30 Module 6 Lab
12:30 *Lunch* 12:00 *Lunch* 12:00 *Lunch*
1:30 Module 2: RNA-Seq Alignment and Visualization (Fouad) 1:00 Module 4: Reference Free Alignment (Malachi) 1:00 Module 7: Functional Annotation and Analysis of Transcripts (Brian)
    1:30 Module 5: Isoform Discovery and Alternative Expression (Malachi)    
3:00 *Coffee Break* 3:00 *Coffee Break* 2:30 *Coffee Break*
3:30 Module 2 Lab 3:30 Module 5 Lab 3:00 Module 7 Lab
5:00 *Dinner* 5:00 *Dinner* 5:00 Suvey and Closing Remarks (Ann)
6:00 Integrated Assignment 6:00 Integrated Assignment