Bioinformatics of Genomic Medicine

Welcome

Welcome to Bioinformatics of Genomic Medicine.

The course schedule can be found here.

Pre-readings, pre-work, and laptop setup instructions can be found here.

If you have questions or comments, visit the workshop Q&A forum.


Class Photo

Class Photo


Unix Tutorial

Lab Practical

Day 1

Welcome

Ann Meyer

Lecture

Module 1: Introduction and Patient Phenotyping and Genetic Disease

Michael Brudno

Lecture

Recording

Lab Practical

Demo Exomes Zip

Coded Phenotypes Zip

Module 2: Introduction to Tools, Computing Infrastructure, and Data

Mathieu Bourgey

Lecture

Recording

Lab Practical

Module 3: Variant Annotation

Guillaume Bourque

Lecture

Recording

Lab Practical

Lab Practical 3b

Demo Exomes Zip

Coded Phenotypes Zip

Module 4: Translating Research Workflows into Clinical Tests

Carl Virtanen

Lecture

Recording


Day 2

Module 5: Available Epigenetics Data and Resources

Guillaume Bourque

Lecture

Recording

Lab Practical

Module 6: Epigenetic Profiling in Disease

Andrei Turinsky

Lecture

Recording

Lab Practical

Lab Script

GEO file

Module 7: Patient Similarity Fusion

Anna Goldenberg

Lecture

Recording

Lab Lecture

Lab Practical
Lab R Data


Survey

Thank you for attending the Bioinformatics of Genomic Medicine workshop! Help us make this workshop better by filling out our survey.