Infectious Disease Epidemiology Analysis 2021
Welcome
The course schedule can be found here
Meet your faculty here
Pre-Workshop Materials
Pre-work including programs to install can be found here
AWS Module
Connecting and properly using a cloud computing cluster at the CBW here
Class Photo
comming soon
Day 1
Welcome
Rachade/Francis
Module1: Introduction to Genomic Epidemiology
William Hsiao
Module 2: Phylogenetic Analysis
William Hsiao
Module 3: Molecular Typing
Ed Taboada & Dillon Barker
Labs
Day 2
Module 4: Phylogenetics, Phylodynamics, and MGE
Rob Beiko
Labs
Module 5: Antimicrobial Resistant Gene Analysis
Finlay Maguire
Labs
Day 3
Module 6: Emerging Pathogen Detection and Identification
Gary Van Domselaar
Labs
Module 7: Keynote: Canada’s National SARS-CoV-2 Genomics Program
Gary Van Domselaar
Module 8: Integrated Assignment
Venus Lau & Jimmy Liu