Workshop Info

Welcome to the 2025 Microbial Genomics Canadian Bioinformatics Workshop webpage!

Pre-work

You can find your pre work here:

Please read 2023 CARD DB publication.
Please read 2023 CARDShark publication.
Please read 2025 Bait Capture VERSION 2 publication.
Please read 2025 CARD k-mers pre-print.
Please read 2025 CZ-ID publication.
To participate in the live coding in Module 5, please read and follow the instructions at Module 5 Pre-Work.

Schedule

AWS Setup Instructions

Note that some of these files are quite large. If you have issues downloading them, try copying the link address, opening a new blank tab, and entering the URL into the new tab’s address bar. If that fails, contact us at info@bioinformatics.ca.

AWS Region: us-east-1 (N. Virgina)
AMI name: CBW_MIG_251117
AMI ID: ami-0e32fdae1a358dbcb

https://hpc4health.ca/cbw/2025/MIG/MIG_module2.tar https://hpc4health.ca/cbw/2025/MIG/MIG_module3-MGE.tar https://hpc4health.ca/cbw/2025/MIG/MIG_module4.tar https://hpc4health.ca/cbw/2025/MIG/MIG_module5.tar